Antibiogram profile prediction of selected bacterial strains by in silico determination of acquired antimicrobial resistance genes from their whole-genome sequence

Abstract

The ResFinder results obtained for the 2 strains of S. enterica, 2 strains of P. aeruginosa, 1 strain each of C. jejuni, K. pneumoniae and E. coli are presented in Tables 2, 3, 4, 5 and 6, respectively, detailing the ARGs, percentage identity/similarity of the detected genes to the genes available on the ResFinder server and their predicted resistance phenotypes.